EP 60: NGS for Veterinary Diagnostics with Janina Krumbeck (MiDog)
In this episode of the Bioinformatics Lab Podcast, Janina Krumbeck shares her unique journey from Germany to the United States, detailing her academic experiences and the challenges she faced during her PhD program. She discusses the importance of mentorship, the transition from academia to industry, and her current role in the microbiomics team at Zymo Research. Janina emphasizes the value of persistence and finding a fulfilling career path in the biotech industry.
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49:55
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49:55
EP 59: Navigating Bioinformatics and Public Health with Amy Gaskin
In this conversation, Amy Gaskin shares her journey into bioinformatics, detailing her transition from an ecological background to a career in public health. She discusses the pivotal moments that led her to discover her passion for bioinformatics, the essential skills she acquired during her master's program, and her experiences working in pathogen genomics during the COVID-19 pandemic. Amy emphasizes the importance of workflow management, containerization, and standardization in bioinformatics, particularly in the context of public health. She also reflects on her current work modernizing HIV pipelines and the collaborative efforts within the field.
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59:12
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59:12
EP 58: From Veterinary Medicine to Pathogen Genomics with Gültekin Ünal
In this episode of the Bioinformatics Lab podcast, Gültekin Ünal shares his unique journey from veterinary medicine to bioinformatics, highlighting the pivotal moments that shaped his career.
For more information about the PHA4GE organization discussed in this episode, please visit: https://pha4ge.org/
He discusses the importance of microbiology in understanding diseases, the impact of COVID-19 on public health practices, and the significance of the One Health approach in integrating animal and human health. Gültekin emphasizes the role of bioinformatics in pathogen surveillance and the need for collaboration within the scientific community to address global health challenges.
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1:21:53
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1:21:53
EP 57 Open Conversation with Tommy Tang
Tommy's Blog: https://divingintogeneticsandgenomics.com/
Summary In this conversation, Kevin Libuit and Tommy Tang explore the journey of communication in science, particularly in the field of bioinformatics. They discuss the importance of sharing knowledge, the transition from wet lab to computational biology, and the evolution of bioinformatics tools. Tommy shares his experiences with learning Unix, the balance between remote work and in-person interactions, and the mindset of finding opportunities in crises. The conversation highlights the significance of humility, continuous learning, and the interconnectedness of roles within the scientific community.
Takeaways
Tommy started his blog to document his learning journey in bioinformatics.
Criticism can be a positive opportunity for growth and collaboration.
Journaling experiences helps in personal growth and reflection.
Unix skills are foundational for bioinformatics and computational biology.
The transition from wet lab to computational biology can be challenging but rewarding.
Understanding the data generation process is crucial for analysis.
In-person interactions enhance communication and collaboration.
The biotech startup environment fosters agility and innovation.
Mindset shifts can turn crises into opportunities.
The distinction between analysts and developers is becoming more pronounced in the field.
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49:39
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49:39
EP 56 Open Conversation with Keith Robison
Ketih's Blog, Omics Omics: https://omicsomics.blogspot.com/
Summary
In this conversation, Keith Robison discusses the inception of his blog Omix, the evolution of social media in the scientific community, and the importance of feedback and community engagement in scientific writing. He delves into the changing landscape of sequencing technologies, highlighting the emergence of new companies and the implications for biodiversity research. The discussion also touches on the future of sequencing, the challenges of cost reduction, and the potential for sequencing technologies to explore previously uncharted biological phenomena.
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